Netzschleuder
network catalogue, repository and centrifuge
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You may also take a look at the source code.
The network in this dataset can be loaded directly from graph-tool with:import graph_tool.all as gt g = gt.collection.ns["interactome_stelzl"]
interactome_stelzl — Stelzl human interactome (2005)
- Description
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents an interaction between two proteins, as inferred via high-throughput Y2H experiments using bait and prey methodology.1
- Tags
- Biological Protein interactions Unweighted
- Citation
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- U. Stelzl et al. "A human protein-protein interaction network: a resource for annotating the proteome." Cell 122, 957-968 (2005), https://doi.org/10.1016/j.cell.2005.08.029 [@sci-hub]
- Upstream URL OK
- http://konect.cc/networks/maayan-Stelzl
- Networks
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Tip: hover your mouse over a table header to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv interactome_stelzl 1,706 6,207 3.64 13.79 15.47 77.05 -0.18 0.01 13 0.95 Directed Unipartite 39 KiB 56 KiB 53 KiB 44 KiB - Ridiculograms
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