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History of academia_edu

The changes to the source code of this entry in the repository, newest first, each with the differences it made to the entry's files. They are also listed on GitLab.

[entries] Add the date when each entry was added, and remove icon_hash by Tiago de Paula Peixoto beff7c9
The dates are those of the commits that first added the entries' files
(2020-08-11 for the entries of the initial commit); renamed entries keep
the date of their first name.

Changed: none
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 9f35711..b9ecab4 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -27,7 +27,7 @@ The network has the following properties:
 tags = ['Social', 'Online', 'Unweighted']
 url = 'https://data4goodlab.github.io/MichaelFire/#section3'
 citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://doi.org/10.1145/2542182.2542192')]
-icon_hash = '59fe94ceee01e9ab21ac7fc6'
+date_added = '2020-08-11'
 upstream_license = None
 upstream_prefix = 'https://data4goodlab.github.io/MichaelFire/datasets'
 # The original host no longer serves the files; they are preserved in the
[entries] Prefix the properties in the descriptions with (Node), (Edge) or (Graph) by Tiago de Paula Peixoto bc3dbbd
The lists of properties at the end of the descriptions marked edge
properties with "Edge" but left node properties unmarked, or grouped
them in "Nodes: `a`, ...; `b`, ..." items, so the kind of a property
was often unclear. Every item now starts with (Node), (Edge) or (Graph),
followed by the property names, a colon and the explanation, one item
per property or group of properties; qualifications (kinds of nodes,
networks) follow the names in parentheses. Properties that were only
named got a short explanation, and a few items that named the wrong
kind of property were corrected.
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 78b60ae..9f35711 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -23,7 +23,7 @@ description = r"""A snapshot of the follower network among users of Academia.edu
 
 The network has the following properties:
 
-- Nodes: `name`, the anonymized user identifier."""
+- (Node) `name`: the anonymized user identifier."""
 tags = ['Social', 'Online', 'Unweighted']
 url = 'https://data4goodlab.github.io/MichaelFire/#section3'
 citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://doi.org/10.1145/2542182.2542192')]
[entries] Remove unneeded code from the entries by Tiago de Paula Peixoto 2c69f19
Unneeded "global files" statements, unused imports and variables,
f-strings without placeholders, duplicate keys in foodweb_little_rock
(keeping the order and the values used), and the second definition of
get_lines() in twitter_higgs. Nothing changes in the networks or
descriptions.

Changed: none
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 7be7508..78b60ae 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -43,7 +43,6 @@ def fetch_upstream(force=False):
 @coerce_props()
 @annotate()
 def parse(alts=None):
-    global files
     name = __name__.split(".")[-1]
     for fnames, alt, fmt in files:
         if alts is not None and alt not in alts:
[entries] Fix parse bugs and improve descriptions and metadata by Tiago de Paula Peixoto 6bb6851
- parse fixes from the review of the descriptions, e.g. us_patents
  (directed), celegans_2019 (synapse direction), ecoli_transcription and
  yeast_transcription (regulator to target), bitcoin (direction, phantom
  node), ego_social (Google+ features and circles), scotus_majority,
  arxiv_authors and social_location (as in SNAP), caida_as, dnc, dom,
  mist, reuters and bibsonomy (names on the right nodes), uci_zoo
- every description now states explicitly what the nodes and edges
  represent; corrected titles, years, tags, citations and licences
- the "Hypergraph" tag is removed; very large entries are marked
  `huge = True` (see --skip-huge)
- ICON ids of partial duplicates added (hiv_transmission, congress_bills,
  openflights, dutch_school)
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 8abd257..7be7508 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -18,15 +18,21 @@
 
 from .. import *
 
-title = "Academica.edu (2011)"
-description = """Snapshot of the follower relationships among users of academia.edu, a platform for academics to share research papers, scraped in 2011. Nodes are users and a directed edge (i,j) denotes that user i follows j.[^icon]
-[^icon]: Description obtained from the [ICON](https://icon.colorado.edu) project."""
+title = "Academia.edu (2011)"
+description = r"""A snapshot of the follower network among users of Academia.edu, a platform where academics share their papers and follow the research of other academics. Nodes are users, and a directed edge $i \to j$ means that user $i$ follows user $j$. The data were collected (around 2011) and anonymized by M. Fire and collaborators at Ben-Gurion University of the Negev, and used as one of the social networks in their study of link prediction.
+
+The network has the following properties:
+
+- Nodes: `name`, the anonymized user identifier."""
 tags = ['Social', 'Online', 'Unweighted']
 url = 'https://data4goodlab.github.io/MichaelFire/#section3'
 citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://doi.org/10.1145/2542182.2542192')]
 icon_hash = '59fe94ceee01e9ab21ac7fc6'
-ustream_license = None
+upstream_license = None
 upstream_prefix = 'https://data4goodlab.github.io/MichaelFire/datasets'
+# The original host no longer serves the files; they are preserved in the
+# netzschleuder mirror
+orphan = True
 files = [('academiaAnonymized.zip:academiaAnonymized/academia2Anonymized.csv', None, 'csv')]
 
 def fetch_upstream(force=False):
Update copyright information by Tiago de Paula Peixoto 73a4f0d
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index d1e1c56..8abd257 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python
 # -*- coding: utf-8 -*-
 #
-# Copyright (C) 2020-2024 Tiago de Paula Peixoto <tiago@skewed.de>
+# Copyright (C) 2020-2026 Tiago de Paula Peixoto <tiago@skewed.de>
 #
 # This program is free software: you can redistribute it and/or modify it under
 # the terms of the GNU Affero General Public License as published by the Free
Update copyright information by Tiago de Paula Peixoto 3d288ea
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 8c63b12..d1e1c56 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python
 # -*- coding: utf-8 -*-
 #
-# Copyright (C) 2020-2023 Tiago de Paula Peixoto <tiago@skewed.de>
+# Copyright (C) 2020-2024 Tiago de Paula Peixoto <tiago@skewed.de>
 #
 # This program is free software: you can redistribute it and/or modify it under
 # the terms of the GNU Affero General Public License as published by the Free
Update copyright information by Tiago de Paula Peixoto 8d005ae
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 412ca58..8c63b12 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python
 # -*- coding: utf-8 -*-
 #
-# Copyright (C) 2021 Tiago de Paula Peixoto <tiago@skewed.de>
+# Copyright (C) 2020-2023 Tiago de Paula Peixoto <tiago@skewed.de>
 #
 # This program is free software: you can redistribute it and/or modify it under
 # the terms of the GNU Affero General Public License as published by the Free
Update upstream for https://data4goodlab.github.io/ by Tiago de Paula Peixoto 43c55e3
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 5806a73..412ca58 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -22,11 +22,11 @@ title = "Academica.edu (2011)"
 description = """Snapshot of the follower relationships among users of academia.edu, a platform for academics to share research papers, scraped in 2011. Nodes are users and a directed edge (i,j) denotes that user i follows j.[^icon]
 [^icon]: Description obtained from the [ICON](https://icon.colorado.edu) project."""
 tags = ['Social', 'Online', 'Unweighted']
-url = 'https://homes.cs.washington.edu/~fire/#section3'
+url = 'https://data4goodlab.github.io/MichaelFire/#section3'
 citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://doi.org/10.1145/2542182.2542192')]
 icon_hash = '59fe94ceee01e9ab21ac7fc6'
 ustream_license = None
-upstream_prefix = 'https://www.ise.bgu.ac.il/faculty/fire/datasets'
+upstream_prefix = 'https://data4goodlab.github.io/MichaelFire/datasets'
 files = [('academiaAnonymized.zip:academiaAnonymized/academia2Anonymized.csv', None, 'csv')]
 
 def fetch_upstream(force=False):
Update copyright info by Tiago de Paula Peixoto db2efcc
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 911cecb..5806a73 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -1,7 +1,7 @@
 #! /usr/bin/env python
 # -*- coding: utf-8 -*-
 #
-# Copyright (C) 2020 Tiago de Paula Peixoto <tiago@skewed.de>
+# Copyright (C) 2021 Tiago de Paula Peixoto <tiago@skewed.de>
 #
 # This program is free software: you can redistribute it and/or modify it under
 # the terms of the GNU Affero General Public License as published by the Free
Update citations to use DOIs by Tiago de Paula Peixoto e878874
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index cfa571d..911cecb 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -23,7 +23,7 @@ description = """Snapshot of the follower relationships among users of academia.
 [^icon]: Description obtained from the [ICON](https://icon.colorado.edu) project."""
 tags = ['Social', 'Online', 'Unweighted']
 url = 'https://homes.cs.washington.edu/~fire/#section3'
-citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://homes.cs.washington.edu/~fire/pdf/link_tists.pdf')]
+citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://doi.org/10.1145/2542182.2542192')]
 icon_hash = '59fe94ceee01e9ab21ac7fc6'
 ustream_license = None
 upstream_prefix = 'https://www.ise.bgu.ac.il/faculty/fire/datasets'
Change license from GPLv3 to AGPLv3 by Tiago de Paula Peixoto d754be5
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 79fb3df..cfa571d 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -3,18 +3,18 @@
 #
 # Copyright (C) 2020 Tiago de Paula Peixoto <tiago@skewed.de>
 #
-# This program is free software: you can redistribute it and/or modify
-# it under the terms of the GNU General Public License as published by
-# the Free Software Foundation, either version 3 of the License, or
-# (at your option) any later version.
+# This program is free software: you can redistribute it and/or modify it under
+# the terms of the GNU Affero General Public License as published by the Free
+# Software Foundation, either version 3 of the License, or (at your option) any
+# later version.
 #
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU General Public License for more details.
+# This program is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+# FOR A PARTICULAR PURPOSE.  See the GNU Affero General Public License for more
+# details.
 #
-# You should have received a copy of the GNU General Public License
-# along with this program.  If not, see <http://www.gnu.org/licenses/>.
+# You should have received a copy of the GNU Affero General Public License along
+# with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 from .. import *
 
Add explicit attribution to descriptions obtained from ICON by Tiago de Paula Peixoto 1645314
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
index 01bf05b..79fb3df 100644
--- a/entries/academia_edu/__init__.py
+++ b/entries/academia_edu/__init__.py
@@ -19,7 +19,8 @@
 from .. import *
 
 title = "Academica.edu (2011)"
-description = "Snapshot of the follower relationships among users of academia.edu, a platform for academics to share research papers, scraped in 2011. Nodes are users and a directed edge (i,j) denotes that user i follows j."
+description = """Snapshot of the follower relationships among users of academia.edu, a platform for academics to share research papers, scraped in 2011. Nodes are users and a directed edge (i,j) denotes that user i follows j.[^icon]
+[^icon]: Description obtained from the [ICON](https://icon.colorado.edu) project."""
 tags = ['Social', 'Online', 'Unweighted']
 url = 'https://homes.cs.washington.edu/~fire/#section3'
 citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://homes.cs.washington.edu/~fire/pdf/link_tists.pdf')]
Initial commit by Tiago de Paula Peixoto cc85872
diff --git a/entries/academia_edu/__init__.py b/entries/academia_edu/__init__.py
new file mode 100644
index 0000000..01bf05b
--- /dev/null
+++ b/entries/academia_edu/__init__.py
@@ -0,0 +1,49 @@
+#! /usr/bin/env python
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2020 Tiago de Paula Peixoto <tiago@skewed.de>
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program.  If not, see <http://www.gnu.org/licenses/>.
+
+from .. import *
+
+title = "Academica.edu (2011)"
+description = "Snapshot of the follower relationships among users of academia.edu, a platform for academics to share research papers, scraped in 2011. Nodes are users and a directed edge (i,j) denotes that user i follows j."
+tags = ['Social', 'Online', 'Unweighted']
+url = 'https://homes.cs.washington.edu/~fire/#section3'
+citation = [('M. Fire et al. "Computationally Efficient Link Prediction in a Variety of Social Networks." ACM Transactions on Intelligent Systems and Technology 5(1), Article 10 (2013)', 'https://homes.cs.washington.edu/~fire/pdf/link_tists.pdf')]
+icon_hash = '59fe94ceee01e9ab21ac7fc6'
+ustream_license = None
+upstream_prefix = 'https://www.ise.bgu.ac.il/faculty/fire/datasets'
+files = [('academiaAnonymized.zip:academiaAnonymized/academia2Anonymized.csv', None, 'csv')]
+
+def fetch_upstream(force=False):
+    return fetch_upstream_files(__name__.split(".")[-1], upstream_prefix, files,
+                                force)
+
+@cache_network()
+@coerce_props()
+@annotate()
+def parse(alts=None):
+    global files
+    name = __name__.split(".")[-1]
+    for fnames, alt, fmt in files:
+        if alts is not None and alt not in alts:
+            continue
+        if isinstance(fnames, str):
+            fnames = [fnames]
+        with ExitStack() as stack:
+            fs = [stack.enter_context(open_upstream_file(name, fn, "rb")) for fn in fnames]
+            g = parse_graph(fs, fmt, directed=True)
+        yield alt, g