celegans_interactomes — C. elegans interactomes (2009)

Description

Ten networks of protein-protein interactions in Caenorhabditis elegans (nematode), from yeast two-hybrid experiments, biological process maps, literature curation, orthologous interactions, and genetic interactions. The WI8 network combines WI2004, WI2007 and BPmaps, while the Integrated Network combines data from all sources¹

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1. Description obtained from the ICON project. ↩

Tags

Biological Protein interactions Unweighted

Citation

• N. Simonis et al., "Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network." Nature Methods 6(1), 47-54 (2009), https://doi.org/10.1038/nmeth.1279 [@sci-hub]

Upstream URL OK

http://interactome.dfci.harvard.edu/C_elegans/index.php?page=download

Networks

Tip: click on the table header to sort the list. Hover your mouse over it to obtain a legend.

Name	Nodes	Edges	$\left<k\right>$	$\sigma_k$	$\lambda_h$	$\tau$	$r$	$c$	$\oslash$	$S$	Kind	Mode	NPs	EPs	gt	GraphML	GML	csv
wi2007	1,496	1,816	2.43	4.48	7.86	93.32	-0.17	0.02	16	0.74	Undirected	Unipartite	name		35 KiB	46 KiB	45 KiB	36 KiB
wi2004	1,237	1,735	2.81	5.27	8.82	55.47	-0.18	0.02	14	0.88	Undirected	Unipartite	name		29 KiB	37 KiB	36 KiB	29 KiB
BPmaps	537	554	2.06	2.58	3.29	96.79	-0.25	0.02	18	0.64	Undirected	Unipartite	name		13 KiB	17 KiB	16 KiB	13 KiB
LCI	431	438	2.03	4.74	5.62	187.61	-0.16	0.04	11	0.27	Undirected	Unipartite	name		10 KiB	13 KiB	13 KiB	10 KiB
Microarray	2,436	136,930	112.42	167.11	358.18	2133.71	-0.07	0.52	21	0.96	Undirected	Unipartite	name		135 KiB	482 KiB	485 KiB	365 KiB
Phenotypes	912	22,738	49.86	47.35	93.61	4.27	-0.03	0.35	5	0.97	Undirected	Unipartite	name		40 KiB	103 KiB	88 KiB	69 KiB
Interolog	2,724	14,322	10.52	20.23	71.43	139.68	-0.01	0.44	15	0.87	Undirected	Unipartite	name		68 KiB	113 KiB	111 KiB	89 KiB
Genetic	759	1,593	4.20	5.15	10.46	53.09	-0.03	0.19	13	0.90	Undirected	Unipartite	name		19 KiB	24 KiB	24 KiB	19 KiB
WI8	2,528	3,864	3.06	5.78	11.43	40.08	-0.14	0.02	14	0.88	Undirected	Unipartite	name		60 KiB	79 KiB	77 KiB	61 KiB
IntegratedNetwork	6,176	178,151	57.69	123.63	361.03	114.24	0.16	0.47	12	0.97	Undirected	Unipartite	name		260 KiB	784 KiB	749 KiB	554 KiB

Ridiculograms