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The network in this dataset can be loaded directly from graph-tool with:
import graph_tool.all as gt
g = gt.collection.ns["drosophila_flybi"]

drosophila_flybi — Fruit fly protein interactions (Drosophila melanogaster)


Binary protein-protein interactions (PPIs) for Drosophila melanogaster, containing 8723 PPIs among 2939 proteins. The iteractions were identified using a yeast two-hybrid (Y2H) analysis.

Biological Protein interactions Unweighted
Upstream URL 403
Upstream license
CC BY 4.0, https://creativecommons.org/licenses/by/4.0/
Tip: hover your mouse over a table header to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv
drosophila_flybi 2,939 8,723 5.94 10.72 25.26 52.25 -0.12 0.04 10 0.92 Undirected Unipartite code name direction screens assays database reference exp_direct exp_indirect comment 96 KiB 152 KiB 138 KiB 118 KiB
None drawing