Netzschleuder
network catalogue, repository and centrifuge
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The network in this dataset can be loaded directly from graph-tool with:import graph_tool.all as gt g = gt.collection.ns["drosophila_flybi"]
drosophila_flybi — Fruit fly protein interactions (Drosophila melanogaster)
- Description
Binary protein-protein interactions (PPIs) for Drosophila melanogaster, containing 8723 PPIs among 2939 proteins. The iteractions were identified using a yeast two-hybrid (Y2H) analysis.
- Tags
- Biological Protein interactions Unweighted
- Citation
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- Tang, HW., Spirohn, K., Hu, Y. et al. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Nat Commun 14, 2162 (2023), https://doi.org/10.1038/s41467-023-37876-0 [@sci-hub]
- Upstream URL 403
- https://doi.org/10.1038/s41467-023-37876-0
- Upstream license
- CC BY 4.0, https://creativecommons.org/licenses/by/4.0/
- Networks
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Tip: hover your mouse over a table header to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv drosophila_flybi 2,939 8,723 5.94 10.72 25.26 52.25 -0.12 0.04 10 0.92 Undirected Unipartite code name direction screens assays database reference exp_direct exp_indirect comment 96 KiB 152 KiB 138 KiB 118 KiB - Ridiculograms
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