# Netzschleuder network catalogue, repository and centrifuge

Problems with this dataset? Open an issue.
You may also take a look at the source code.
The networks in this dataset can be loaded directly from graph-tool with:
import graph_tool.all as gt
g = gt.collection.ns["ecoli_transcription/v1.0"]

(and likewise for the other networks available.)

# ecoli_transcription — E. coli transcription network (2002)

Description

Network of operons and their pairwise interactions, via transcription factor-based regulation, within the bacteria Escherichia coli1

1. Description obtained from the ICON project.

Tags
Biological Gene regulation Unweighted
Citation
Upstream URL OK
http://www.weizmann.ac.il/mcb/UriAlon/e-coli-transcription-network
Networks
Tip: click on the table header to sort the list. Hover your mouse over it to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv
v1.0 424 577 1.36 4.88 6.12 141.95 -0.19 0.02 13 0.78 Directed Unipartite name regulation_type 8 KiB 12 KiB 11 KiB 9 KiB
v1.1 423 578 1.37 4.90 6.20 141.96 -0.19 0.02 13 0.78 Directed Unipartite name regulation_type 8 KiB 12 KiB 11 KiB 9 KiB
Ridiculograms