gene_fusion — Gene fusions in human neoplasia (2006)
- Description
A network of gene fusions observed in human cancers, from Höglund et al. (2006), as distributed by KONECT (from P. Holme's collection). Each node is a gene, and an undirected edge connects two genes that were observed to fuse (through chromosomal rearrangements) in neoplasia, according to the Mitelman Database of Chromosome Aberrations in Cancer. The data identify the genes only by indices (their names are not included).
- Tags
- Biological Genetic Unweighted
- Citation
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- M. Höglund, A. Frigyesi, F. Mitelman, "A gene fusion network in human neoplasia." Oncogene 25(18), 2674-2678 (2006) 10.1038/sj.onc.1209290 Sci-Hub
- J. Kunegis, "KONECT -- The Koblenz Network Collection." Proceedings of the 22nd International Conference on World Wide Web Companion, 1343-1350 (2013) 10.1145/2487788.2488173 Sci-Hub
- Upstream URL OK
- http://konect.cc/networks/gene_fusion
- Networks
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Tip: hover over a column header for a description.
Column legend
- $\left<k\right>$
- Mean degree
- $\sigma_k$
- Standard deviation of the degrees
- $\lambda_h$
- Largest eigenvalue of the Hashimoto (non-backtracking) matrix
- $\tau$
- Random walk mixing time
- $r$
- Degree assortativity
- $c$
- Global clustering coefficient
- $\oslash$
- (Pseudo-) diameter
- $S$
- Relative size of the largest component
- NPs
- Node properties
- EPs
- Edge properties
- Ridiculograms*
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