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Problems with this dataset? Open an issue.
You may also take a look at the source code.
The networks in this dataset can be loaded directly from graph-tool with:
import graph_tool.all as gt
g = gt.collection.ns["genetic_multiplex/Arabidopsis"]
(and likewise for the other networks available.)

genetic_multiplex — Multiplex genetic interactions (2014)

Description

Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.1


  1. Description obtained from the ICON project. 

Tags
Biological Gene regulation Protein interactions Unweighted Multilayer
Citation
Upstream URL OK
https://manliodedomenico.com/data.php
Networks
Tip: click on the table header to sort the list. Hover your mouse over it to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv
Arabidopsis 6,980 18,655 2.67 18.85 21.49 83.73 -0.08 0.03 14 0.96 Directed Unipartite name nodeLabel weight layer 166 KiB 258 KiB 250 KiB 199 KiB
Bos_Multiplex_Genetic 325 322 0.99 2.28 2.56 73.00 -0.24 0.03 12 0.20 Directed Unipartite name nodeLabel weight layer 8 KiB 11 KiB 11 KiB 8 KiB
Candida 367 398 1.08 11.88 3.28 66.85 -0.45 0.00 7 0.83 Directed Unipartite name nodeLabel weight layer 9 KiB 12 KiB 12 KiB 9 KiB
Celegans 3,879 8,182 2.11 13.26 25.60 31.64 -0.14 0.03 13 0.95 Directed Unipartite name nodeLabel weight layer 91 KiB 136 KiB 131 KiB 107 KiB
Drosophila 8,215 43,367 5.28 17.27 46.06 26.69 0.06 0.15 10 0.99 Directed Unipartite name nodeLabel weight layer 239 KiB 415 KiB 383 KiB 311 KiB
DanioRerio 155 188 1.21 2.50 3.63 28.73 0.09 0.16 6 0.20 Directed Unipartite name nodeLabel weight layer 4 KiB 6 KiB 5 KiB 4 KiB
Gallus 313 389 1.24 9.58 5.23 21.46 -0.44 0.01 8 0.65 Directed Unipartite name nodeLabel weight layer 8 KiB 11 KiB 11 KiB 8 KiB
HepatitusCVirus 105 137 1.30 13.10 1.00 0.05 -0.99 0.00 2 0.98 Directed Bipartite name nodeLabel weight layer 3 KiB 4 KiB 4 KiB 3 KiB
Homo 18,222 170,899 9.38 100.44 122.68 14.20 -0.06 0.03 9 1.00 Directed Unipartite name nodeLabel weight layer 607 KiB 1.2 MiB 1.1 MiB 892 KiB
HumanHerpes4 216 259 1.20 11.05 1.60 228.28 -0.52 0.00 7 0.88 Directed Unipartite name nodeLabel weight layer 5 KiB 8 KiB 7 KiB 5 KiB
HumanHIV1 1,005 1,355 1.35 16.35 8.60 26.39 -0.65 0.00 5 1.00 Directed Unipartite name nodeLabel weight layer 23 KiB 34 KiB 32 KiB 25 KiB
Mus 7,747 19,843 2.56 14.41 31.94 59.36 -0.18 0.03 16 0.96 Directed Unipartite name nodeLabel weight layer 183 KiB 296 KiB 286 KiB 230 KiB
Oryctolagus 144 144 1.00 6.52 1.81 0.03 -0.44 0.01 2 0.55 Directed Unipartite name nodeLabel weight layer 4 KiB 6 KiB 5 KiB 4 KiB
Plasmodium 1,203 2,522 2.10 6.05 11.37 12.72 0.01 0.03 10 0.96 Directed Unipartite name nodeLabel weight layer 29 KiB 40 KiB 39 KiB 31 KiB
Rattus 2,640 4,268 1.62 18.11 13.66 85.57 -0.16 0.01 13 0.89 Directed Unipartite name nodeLabel weight layer 63 KiB 92 KiB 89 KiB 70 KiB
Sacchcere 6,570 282,755 43.04 141.24 207.99 4.94 -0.08 0.15 6 1.00 Directed Unipartite name nodeLabel weight layer 520 KiB 1.2 MiB 1.1 MiB 951 KiB
Sacchpomb 4,092 63,677 15.56 64.69 108.20 17.30 -0.23 0.11 8 1.00 Directed Unipartite name nodeLabel weight layer 169 KiB 355 KiB 324 KiB 262 KiB
Xenopus 461 620 1.34 3.43 4.30 115.21 -0.14 0.12 14 0.57 Directed Unipartite name nodeLabel weight layer 11 KiB 17 KiB 16 KiB 12 KiB
YeastLandscape 4,458 8,473,997 1900.85 818.52 3913.37 1.12 -0.01 0.93 2 1.00 Directed Unipartite name nodeLabel weight layer 14.5 MiB 52.4 MiB 35.5 MiB 33.6 MiB
Ridiculograms
Arabidopsis drawing
Arabidopsis
Bos_Multiplex_Genetic drawing
Bos_Multiplex_Genetic
Candida drawing
Candida
Celegans drawing
Celegans
Drosophila drawing
Drosophila
DanioRerio drawing
DanioRerio
Gallus drawing
Gallus
HepatitusCVirus drawing
HepatitusCVirus
Homo drawing
Homo
HumanHerpes4 drawing
HumanHerpes4
HumanHIV1 drawing
HumanHIV1
Mus drawing
Mus
Oryctolagus drawing
Oryctolagus
Plasmodium drawing
Plasmodium
Rattus drawing
Rattus
Sacchcere drawing
Sacchcere
Sacchpomb drawing
Sacchpomb
Xenopus drawing
Xenopus
YeastLandscape drawing
YeastLandscape