Netzschleuder
network catalogue, repository and centrifuge
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You may also take a look at the source code.
The network in this dataset can be loaded directly from graph-tool with:import graph_tool.all as gt g = gt.collection.ns["interactome_vidal"]
interactome_vidal — Vidal human interactome (2005)
- Description
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents a binding interaction between two proteins, as tested using a high-throughput yeast two-hybrid (Y2H) system.1
- Tags
- Biological Protein interactions Unweighted
- Citation
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- JF. Rual et al. "Towards a proteome-scale map of the human protein–protein interaction network." Nature 437.7062, 1173-1178. (2005)., https://doi.org/10.1038/nature04209 [@sci-hub]
- Upstream URL OK
- http://konect.cc/networks/maayan-vidal
- Networks
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Tip: hover your mouse over a table header to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv interactome_vidal 3,133 6,726 4.29 6.88 13.91 39.11 -0.10 0.04 13 0.89 Undirected Unipartite 65 KiB 88 KiB 85 KiB 68 KiB - Ridiculograms
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