reactome — Joshi-Tope human protein interactome (2005)

Description

A network of human proteins and their binding interactions, extracted from Reactome project. Nodes represent proteins and an edge represents a binding interaction between two proteins.¹

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1. Description obtained from the ICON project. ↩

Tags

Biological Protein interactions Unweighted

Citation

• G. Joshi-Tope et al. "Reactome: a knowledgebase of biological pathways." Nucleic Acids Research 33.suppl 1, D428-D432 (2005)., https://doi.org/10.1093/nar/gki072 [@sci-hub]

Upstream URL OK

http://konect.cc/networks/reactome

Networks

Tip: hover your mouse over a table header to obtain a legend.

Name	Nodes	Edges	$\left<k\right>$	$\sigma_k$	$\lambda_h$	$\tau$	$r$	$c$	$\oslash$	$S$	Kind	Mode	NPs	EPs	gt	GraphML	GML	csv
reactome	6,327	147,547	46.64	66.81	207.04	170.67	0.25	0.61	24	0.94	Undirected	Unipartite			187 KiB	608 KiB	605 KiB	450 KiB

Ridiculograms^*

^* These are automatically generated force-directed visualizations, and can be quite meaningless for networks both big and small. They should not be taken seriously as sources of scientific insight. See here for a discussion.