Netzschleuder
network catalogue, repository and centrifuge
Problems with this dataset? Open an issue.
You may also take a look at the source code.
The network in this dataset can be loaded directly from graph-tool with:import graph_tool.all as gt g = gt.collection.ns["reactome"]
reactome — Joshi-Tope human protein interactome (2005)
- Description
A network of human proteins and their binding interactions, extracted from Reactome project. Nodes represent proteins and an edge represents a binding interaction between two proteins.1
- Tags
- Biological Protein interactions Unweighted
- Citation
-
- G. Joshi-Tope et al. "Reactome: a knowledgebase of biological pathways." Nucleic Acids Research 33.suppl 1, D428-D432 (2005)., https://doi.org/10.1093/nar/gki072 [@sci-hub]
- Upstream URL OK
- http://konect.cc/networks/reactome
- Networks
-
Tip: hover your mouse over a table header to obtain a legend.
Name Nodes Edges $\left<k\right>$ $\sigma_k$ $\lambda_h$ $\tau$ $r$ $c$ $\oslash$ $S$ Kind Mode NPs EPs gt GraphML GML csv reactome 6,327 147,547 46.64 66.81 207.04 170.67 0.25 0.61 24 0.94 Undirected Unipartite 187 KiB 608 KiB 605 KiB 450 KiB - Ridiculograms
-