Showing only entries with tags:
Chemical
Tip: click on a column header to sort the list, or hover over it for a description.
Tip: click on a column header to sort the list, or hover over it for a description.
Column legend
- $\left<k\right>$
- Mean degree
- $\sigma_k$
- Standard deviation of the degrees
- $\lambda_h$
- Largest eigenvalue of the Hashimoto (non-backtracking) matrix
- $\tau$
- Random walk mixing time
- $r$
- Degree assortativity
- $c$
- Global clustering coefficient
- $\oslash$
- (Pseudo-) diameter
- $S$
- Relative size of the largest component
- $n$
- Number of networks
| Name | Title | Nodes | Edges | $\left<k\right>$ | $\sigma_k$ | $\lambda_h$ | $\tau$ | $r$ | $c$ | $\oslash$ | $S$ | Kind | Mode | $n$ | Added | Tags |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| bindingdb | BindingDB protein-ligand binding affinities (2023-2026) | 1,457,723 | 3,243,660 | 4.45 | 104.16 | 185.15 | 9911.36 | -0.30 | 0.00 | 20 | 0.97 | Undirected | Bipartite | 4 | 2026-10-31 | Biological Chemical Drug interactions Weighted Bipartite Multigraph Metadata |
| chembl_ |
ChEMBL compound-target bioactivities (2026) | 2,939,700 | 24,527,044 | 16.69 | 1704.28 | 1482.97 | 551.02 | -0.12 | 0.00 | 12 | 0.96 | Undirected | Bipartite | 1 | 2026-10-28 | Biological Chemical Drug interactions Weighted Multigraph Metadata |
| ctd_ |
Comparative Toxicogenomics Database associations (CTD, 2026) | 73,813 | 3,171,202 | 85.93 | 860.72 | 702.50 | 8.23 | -0.15 | 0.00 | 8 | 1.00 | Undirected | Bipartite | 4 | 2026-10-28 | Biological Chemical Public Health Unweighted Multigraph Metadata |
| flavor_ |
Food ingredients, flavor compounds and recipes (2011) | 58,074 | 476,250 | 16.40 | 252.84 | 255.25 | 4.26 | -0.39 | 0.00 | 7 | 1.00 | Undirected | Bipartite | 2 | 2026-10-25 | Chemical Online Unweighted Metadata |
| fullerene_ |
Fullerene molecular structures (2017) | 6,000 | 9,000 | 3.00 | 0.00 | 2.00 | 1241.32 | nan | 0.00 | 99 | 1.00 | Undirected | Unipartite | 15 | 2020-08-11 | Chemical Unweighted Spatial |
| lotus_ |
LOTUS natural products and the organisms they occur in (2021-2026) | 338,694 | 6,438,722 | 38.02 | 289.05 | 126.44 | 1674.17 | -0.03 | 0.00 | 22 | 0.93 | Undirected | Bipartite | 16 | 2026-10-31 | Biological Chemical Unweighted Bipartite Multigraph Metadata |
| mcm_ |
Master Chemical Mechanism and CRI mechanism of atmospheric chemistry (1999-2023) | 22,530 | 55,455 | 2.46 | 61.40 | 48.76 | 6.58 | -0.18 | 0.00 | 9 | 1.00 | Directed | Bipartite | 7 | 2026-10-31 | Chemical Unweighted Bipartite Multigraph Metadata |
| metanetx_ |
MetaNetX/MNXref reconciled metabolic reactions (2013-2025) | 131,442 | 382,400 | 2.91 | 121.66 | 153.79 | 293.10 | -0.13 | 0.00 | 32 | 0.99 | Directed | Bipartite | 11 | 2026-10-31 | Biological Metabolic Chemical Unweighted Bipartite Metadata |
| ndc_ |
FDA National Drug Code directory (2017) | 118,475 | 227,494 | 3.84 | 43.93 | 90.31 | 5904.75 | -0.17 | 0.00 | 24 | 0.67 | Undirected | Bipartite | 2 | 2026-10-25 | Public Health Chemical Unweighted Timestamps Metadata |
| pubchem_ |
PubChem compound-literature links (2025) | 13,789,196 | 51,878,601 | 7.52 | 441.33 | 1291.52 | 716.76 | -0.15 | 0.00 | 19 | 1.00 | Undirected | Bipartite | 1 | 2026-10-28 | Informational Chemical Unweighted Multigraph Metadata |
| rhea_ |
Rhea biochemical reactions (2026) | 33,814 | 90,303 | 2.67 | 75.35 | 88.96 | 34.99 | -0.15 | 0.00 | 14 | 0.99 | Directed | Bipartite | 2 | 2026-10-31 | Biological Metabolic Chemical Unweighted Bipartite Metadata |
| stitch_ |
STITCH chemical-chemical and protein-chemical associations (2015) | 806,234 | 15,473,939 | 38.39 | 659.94 | 2692.45 | 51.29 | -0.36 | 0.00 | 8 | 1.00 | Undirected | Bipartite | 8 | 2026-10-28 | Biological Chemical Drug interactions Weighted Metadata |